Publications　FY2023

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Publications

FY 2023

1) International collaborative papers (peer reviewed)

1.1) International collaborative papers co-authored with overseas affiliated universities：26

  1. Verstegen NJM, Hagen RR, Kreher C, Kuijper LH, Dijssel JVD, Ashhurst T, Kummer LYL, Palomares Cabeza V, Steenhuis M, Duurland MC, Jongh R, Schoot CEV, Konijn VAL, Mul E, Kedzierska K, van Dam KPJ, Stalman EW, Boekel L, Wolbink G, Tas SW, Killestein J, Rispens T, Wieske L, Kuijpers TW, Eftimov F, van Kempen ZLE, van Ham SM, Ten Brinke A, van de Sandt CE: “T cell activation markers CD38 and HLA-DR indicative of non-seroconversion in anti-CD20-treated patients with multiple sclerosis following SARS-CoV-2 mRNA vaccination”, J Neurol Neurosurg Psychiatry, jnnp-2023-332224(2024) (Online ahead of print)
  2. Ariizumi T, Tabata K, Itakura Y, Kobayashi H, Hall WW, Sasaki M, Sawa H, Matsuno K, Orba Y: “Establishment of a lethal mouse model of emerging tick-borne orthonairovirus infections”, PLoS Pathog, 20(3):e1012101(2024)(Online ahead of print)
  3. Handabile C, Ohno M, Sekiya T, Nomura N, Kawakita T, Kawahara M, Endo M, Nishimura T, Okumura M, Toba S, Sasaki M, Orba Y, Chua BY, Rowntree LC, Nguyen THO, Shingai M, Sato A, Sawa H, Ogasawara K, Kedzierska K, Kida H: “Immunogenicity and protective efficacy of a co-formulated two-in-one inactivated whole virus particle COVID-19/influenza vaccine”, Sci Rep, 14(1):4204(2024)
  4. Klinger CM, Jimenez-Ruiz E, Mourier T, Klingl A, Lemgruber L, Pain A, Dacks JB, Meissner M: “Evolutionary analysis identifies a Golgi pathway and correlates lineage-specific factors with endomembrane organelle emergence in apicomplexans”, Cell Rep, 43(2):113740(2024)
  5. Sasaki M, Sugi T, Iida S, Hirata Y, Kusakabe S, Konishi K, Itakura Y, Tabata K, Kishimoto M, Kobayashi H, Ariizumi T, Intaruck K, Nobori H, Toba S, Sato A, Matsuno K, Yamagishi J, Suzuki T, Hall WW, Orba Y, Sawa H: “Combination therapy with oral antiviral and anti-inflammatory drugs improves the efficacy of delayed treatment in a COVID-19 hamster model”, EBioMedicine, 99:104950(2024)
  6. Habel JR, Chua BY, Kedzierski L, Selva KJ, Damelang T, Haycroft ER, Nguyen TH, Koay HF, Nicholson S, McQuilten HA, Jia X, Allen LF, Hensen L, Zhang W, van de Sandt CE, Neil JA, Pragastis K, Lau JS, Jumarang J, Allen EK, Amanant F, Krammer F, Wragg KM, Juno JA, Wheatley AK, Tan HX, Pell G, Walker S, Audsley J, Reynaldi A, Thevarajan I, Denholm JT, Subbarao K, Davenport MP, Hogarth PM, Godfrey DI, Cheng AC, Tong SY, Bond K, Williamson DA, McMahon JH, Thomas PG, Pannaraj PS, James F, Holmes NE, Smibert OC, Trubiano JA, Gordon CL, Chung AW, Whitehead CL, Kent SJ, Lappas M, Rowntree LC, Kedzierska K: “Immune profiling of SARS-CoV-2 infection during pregnancy reveals NK cell and γδ T cell perturbations”, JCI insight, 8(7)(2023)
  7. Hall VG, Nguyen THO, Allen LF, Rowntree LC, Kedzierski L, Chua BY, Lim C, Saunders NR, Klimevski E, Tennakoon GS, Seymour JF, Wadhwa V, Cain N, Vo KL, Nicholson S, Karapanagiotidis T, Williamson DA, Thursky KA, Spelman T, Yong MK, Slavin MA, Kedzierska K, Teh BW: “Evolution of Humoral and Cellular Immunity Post-Breakthrough Coronavirus Disease 2019 in Vaccinated Patients With Hematologic Malignancy Receiving Tixagevimab-Cilgavimab”, Open Forum Infect. Dis, 10(11):ofad550(2023)
  8. Hayashida K, Garcia A, Moonga LC, Sugi T, Takuya K, Kawase M, Kodama F, Nagasaka A, Ishiguro N, Takada A, Kajihara M, Nao N, Shingai M, Kida H, Suzuki Y, Hall WW, Sawa H, Yamagishi J: “Field-deployable multiplex detection method of SARS-CoV-2 and influenza virus using loop-mediated isothermal amplification and DNA chromatography”, PloS one, 18(5):e0285861(2023)
  9. Itakura Y, Tabata K, Saito T, Intaruck K, Kawaguchi N, Kishimoto M, Torii S, Kobayashi S, Ito N, Harada M, Inoue S, Maeda K, Takada A, Hall WW, Orba Y, Sawa H, Sasaki M: “Morphogenesis of Bullet-Shaped Rabies Virus Particles Regulated by TSG101”, J Virol, 97(5):e0043823(2023)
  10. Jagannath A, Li Y, Cong H, Hassan J, Gonzalez G, Wang W, Zhang N, Gilchrist MD: “UV-Assisted Hyperbranched Poly(β-amino ester) Modification of a Silica Membrane for Two-Step Microfluidic DNA Extraction from Blood”, ACS Appl Mate Interfaces, 15(26):31159-31172(2023)
  11. Kapalamula TF, Chizimu JY, Akapelwa ML, Barnes DA, Toyting J, Bwalya P, Basikolo L, Squarre D, Chambaro HM, Gordon SV, Thapa J, Nakajima C, Suzuki Y: “Insight into the genetic diversity of Mycobacterium bovis isolated from cattle in Malawi”, Res Vet Sci, 164:105030(2023)
  12. MacCann R, Leon AAG, Gonzalez G, Carr MJ, Feeney ER, Yousif O, Cotter AG, de Barra E, Sadlier C, Doran P, Mallon PW: “Dysregulated early transcriptional signatures linked to mast cell and interferon responses are implicated in COVID-19 severity”, Front Immunol, 14:1166574(2023)
  13. Nolan TM, Deliyannis G, Griffith M, Braat S, Allen LF, Audsley J, Chung AW, Ciula M, Gherardin NA, Giles ML, Gordon TP, Grimley SL, Horng L, Jackson DC, Juno JA, Kedzierska K, Kent SJ, Lewin SR, Littlejohn M, McQuilten HA, Mordant FL, Nguyen THO, Soo VP, Price B, Purcell DFJ, Ramanathan P, Redmond SJ, Rockman S, Ruan Z, Sasadeusz J, Simpson JA, Subbarao K, Fabb SA, Payne TJ, Takanashi A, Tan CW, Torresi J, Wang JJ, Wang LF, Al-Wassiti H, Wong CY, Zaloumis S, Pouton CW, Godfrey DI: “Interim results from a phase I randomized, placebo-controlled trial of novel SARS-CoV-2 beta variant receptor-binding domain recombinant protein and mRNA vaccines as a 4th dose booster”, EBioMedicine, 98:104878(2023)
  14. Orba Y, Abu YE, Chambaro HM, Lundu T, Muleya W, Eshita Y, Qiu Y, Harima H, Kajihara M, Mori-Kajihara A, Matsuno K, Sasaki M, Hall WW, Hang’ombe BM, Sawa H: “Expanding diversity of bunyaviruses identified in mosquitoes”, Sci Rep, 13(1):18165(2023)
  15. Quan C, Liu Q, Yu L, Li C, Nie K, Ding G, Zhou H, Wang X, Sun W, Wang H, Yue M, Wei L, Zheng W, Lyu Q, Xing W, Zhang Z, Carr MJ, Zhang H, Shi W: “SFTSV infection is associated with transient overproliferation of monoclonal lambda-type plasma cells”, iScience, 26(6):106799(2023)
  16. Shuaib M, Adroub S, Mourier T, Mfarrej S, Zhang H, Esau L, Alsomali A, Alofi FS, Ahmad AN, Shamsan A, Khogeer A, Hashem AM, Almontashiri NAM, Hala S, Pain A: “Impact of the SARS-CoV-2 nucleocapsid 203K/204R mutations on the inflammatory immune response in COVID-19 severity”, Genome Med, 15(1):54(2023)
  17. Subudhi AK, Bienvenu AL, Bonnot G, Abu-Shamma R, Khamis F, Lawati H, Picot S, Petersen E, Pain A: “The first case of artemisinin treatment failure of Plasmodium falciparum imported to Oman from Tanzania”, J Travel Med, 30(3)(2023)
  18. Subudhi AK, Green JL, Satyam R, Lenz T, Salunke RP, Shuaib M, Isaioglou I, Abel S, Gupta M, Esau L, Mourier T, Nugmanova R, Mfarrej S, Sivapurkar R, Stead Z, Rached FB, Otswal Y, Sougrat R, Dada A, Kadamany AF, Fischle W, Merzaban J, Knuepfer E, Ferguson DJP, Gupta I, Le Roch KG, Holder AA, Pain A: “PfAP2-MRP DNA-binding protein is a master regulator of parasite pathogenesis during malaria parasite blood stages”, bioRxiv : Preprint (2023)
  19. Subudhi AK, Green JL, Satyam R, Salunke RP, Lenz T, Shuaib M, Isaioglou I, Abel S, Gupta M, Esau L, Mourier T, Nugmanova R, Mfarrej S, Shivapurkar R, Stead Z, Rached FB, Ostwal Y, Sougrat R, Dada A, Kadamany AF, Fischle W, Merzaban J, Knuepfer E, Ferguson DJP, Gupta I, Le Roch KG, Holder AA, Pain A: “DNA-binding protein PfAP2-P regulates parasite pathogenesis during malaria parasite blood stages”, Nat Microbiol, 8(11):2154-2169(2023)
  20. Surján A, Gonzalez G, Gellért Á, Boldogh S, Carr MJ, Harrach B, Vidovszky MZ: “First detection and genome analysis of simple nosed bat polyomaviruses in Central Europe”, Infect Genet Evol, 112:105439(2023)
  21. Tabata K, Itakura Y, Ariizumi T, Igarashi M, Kobayashi H, Intaruck K, Kishimoto M, Kobayashi S, Hall WW, Sasaki M, Sawa H, Orba Y: “Development of flavivirus subviral particles with low cross-reactivity by mutations of a distinct antigenic domain”, Appl Microbiol Biotechnol, 107(24):7515-7529(2023)
  22. Thapa J, Chizimu JY, Kitamura S, Akapelwa ML, Suwanthada P, Miura N, Toyting J, Nishimura T, Hasegawa N, Nishiuchi Y, Gordon SV, Nakajima C, Suzuki Y: “Characterization of DNA Gyrase Activity and Elucidation of the Impact of Amino Acid Substitution in GyrA on Fluoroquinolone Resistance in Mycobacterium avium”, Microbiol Spectr, 11(3):e0508822(2023)
  23. Uemura K, Nobori H, Sato A, Toba S, Kusakabe S, Sasaki M, Tabata K, Matsuno K, Maeda N, Ito S, Tanaka M, Anraku Y, Kita S, Ishii M, Kanamitsu K, Orba Y, Matsuura Y, Hall WW, Sawa H, Kida H, Matsuda A, Maenaka K: “2-thiouridine is a broad-spectrum antiviral nucleoside analogue against positive-strand RNA viruses”, Proc Nat Acad of Sci USA, 120(42):e2304139120(2023)
  24. Zhang E, Nguyen THO, Allen LF, Kedzierski L, Rowntree LC, Chang SY, Zhang W, Habel JR, Foo IJ, Menon T, Mitchell J, Leong RW, Bond K, Williamson DA, Kedzierska K, Christensen B: “Robust SARS-CoV-2 antibody and T cell immunity following three COVID-19 vaccine doses in inflammatory bowel disease patients receiving anti-TNF or alternative treatments”, Gut, 73(4):712-714(2023)
  25. Zhang W, Rowntree LC, Muttucumaru R, Damelang T, Aban M, Hurt AC, Auladell M, Esterbauer R, Wines B, Hogarth M, Turner SJ, Wheatley AK, Kent SJ, Patil S, Avery S, Morrissey O, Chung AW, Koutsakos M, Nguyen TH, Cheng AC, Kotsimbos TC, Kedzierska K: “Robust immunity to influenza vaccination in haematopoietic stem cell transplant recipients following reconstitution of humoral and adaptive immunity”, Clin Transl immunology, 12(6):e1456(2023)
  26. Zhou H, Liu J, Li L, Sun J, Wei Q, Huan Y, Carr MJ, Bi Y, Shi W: “Circulation of influenza C virus of C/Sao Paulo/378/82 lineage among pediatric acute respiratory cases, Shandong, China”, Virology, 587:109855(2023)

 

1.2) International collaborative papers：29

  1. Munyeku-Bazitama Y, Okitale-Talunda P, Hattori T, Saito T, Lombe BP, Miyamoto H, Mori-Kajihara A, Kajihara M, Nkoy AB, Twabela AT, Masumu J, Ahuka-Mundeke S, Muyembe-Tamfum JJ, Igarashi M, Park ES, Morikawa S, Makiala-Mandanda S, Takada A: “Seroprevalence of Bas-Congo virus in Mangala, Democratic Republic of the Congo: a population-based cross-sectional study”, Lancet Microbe, S2666-5247(24)00021-1 (2024) (Online ahead of print)
  2. Rudeeaneksin J, Bunchoo S, Phetsuksiri B, Srisungngam S, Khummin R, Thapa J, Nakajima C, Suzuki Y: “The first insight into Mycobacterium tuberculosis complex isolates in the lower northern region in Thailand”, Trans R Soc Trop Med Hyg, trae014(2024) (Online ahead of print)
  3. Tsukamoto Y, Igarashi M, Kato H: “Targeting cap1 RNA methyltransferases as an antiviral strategy”, Cell Chem Biol, 31(1):86-99(2024)
  4. Taniguchi K, Noshi T, Omoto S, Sato A, Shishido T, Matsuno K, Okamatsu M, Krauss S, Webby RJ, Sakoda Y, Kida H: “The impact of PA/I38 substitutions and PA polymorphisms on the susceptibility of zoonotic influenza A viruses to baloxavir”, Arch Virol, 169(2):29(2024)
  5. Tamura T, Mizuma K, Nasser H, Deguchi S, Padilla-Blanco M, Oda Y, Uriu K, Tolentino JEM, Tsujino S, Suzuki R, Kojima I, Nao N, Shimizu R, Wang L, Tsuda M, Jonathan M, Kosugi Y, Guo Z, Hinay AA, Jr., Putri O, Kim Y, Tanaka YL, Asakura H, Nagashima M, Sadamasu K, Yoshimura K, Saito A, Ito J, Irie T, Tanaka S, Zahradnik J, Ikeda T, Takayama K, Matsuno K, Fukuhara T, Sato K: “Virological characteristics of the SARS-CoV-2 BA.2.86 variant”, Cell Host Microbe, 32(2):170-180.e112(2024)
  6. Tamura T, Irie T, Deguchi S, Yajima H, Tsuda M, Nasser H, Mizuma K, Plianchaisuk A, Suzuki S, Uriu K, Begum MM, Shimizu R, Jonathan M, Suzuki R, Kondo T, Ito H, Kamiyama A, Yoshimatsu K, Shofa M, Hashimoto R, Anraku Y, Kimura KT, Kita S, Sasaki J, Sasaki-Tabata K, Maenaka K, Nao N, Wang L, Oda Y, Ikeda T, Saito A, Matsuno K, Ito J, Tanaka S, Sato K, Hashiguchi T, Takayama K, Fukuhara T: “Virological characteristics of the SARS-CoV-2 Omicron XBB.1.5 variant”, Nat Commun, 15(1):1176(2024)
  7. Mimura Y, Hiono T, Huynh LT, Ogino S, Kobayashi M, Isoda N, Sakoda Y: “Establishment of a superinfection exclusion method for pestivirus titration using a recombinant reporter pestiviruses”, J Vet Med Sci, (2024)
  8. Kalonda A, Saasa N, Kajihara M, Nao N, Moonga L, Ndebe J, Mori-Kajihara A, Mukubesa AN, Sakoda Y, Sawa H, Takada A, Simulundu E: “Phylogenetic Analysis of Newcastle Disease Virus Isolated from Poultry in Live Bird Markets and Wild Waterfowl in Zambia”, Microorganisms, 12(2)(2024)
  9. Hong J, Mukherjee B, Sanjoba C, Yamagishi J, Goto Y: “Upregulation of ATP6V0D2 benefits intracellular survival of Leishmania donovani in erythrocytes-engulfing macrophages”, Front Cell Infect Microbiol, 14:1332381(2024)
  10. Ito S, Bosch J, Isoda N, Thanh Nguyen L, Martinez Aviles M: “Editorial: Epidemiology of the transboundary swine diseases in Asia & Pacific”, Front Vet Sci, 11:1383900(2024)
  11. Ito S, Aguilar-Vega C, Bosch J, Isoda N, Sánchez-Vizcaíno JM: “Application of machine learning with large-scale data for an effective vaccination against classical swine fever for wild boar in Japan”, Sci Rep, 14(1):5312(2024)
  12. Velu RM, Kwenda G, Bosomprah S, Chisola MN, Simunyandi M, Chisenga CC, Bumbangi FN, Sande NC, Simubali L, Mburu MM, Tembo J, Bates M, Simuunza MC, Chilengi R, Orba Y, Sawa H, Simulundu E: “Ecological Niche Modeling of Aedes and Culex Mosquitoes: A Risk Map for Chikungunya and West Nile Viruses in Zambia”, Viruses, 15(9)(2023)
  13. Toyting J, Miura N, Utrarachkij F, Tanomsridachchai W, Belotindos LP, Suwanthada P, Kapalamula TF, Kongsoi S, Koide K, Kim H, Thapa J, Nakajima C, Suzuki Y: “Exploration of the novel fluoroquinolones with high inhibitory effect against quinolone-resistant DNA gyrase of Salmonella Typhimurium”, Microbiol Spectr, 11(6):e0133023(2023)
  14. Tamura T, Ito J, Uriu K, Zahradnik J, Kida I, Anraku Y, Nasser H, Shofa M, Oda Y, Lytras S, Nao N, Itakura Y, Deguchi S, Suzuki R, Wang L, Begum MM, Kita S, Yajima H, Sasaki J, Sasaki-Tabata K, Shimizu R, Tsuda M, Kosugi Y, Fujita S, Pan L, Sauter D, Yoshimatsu K, Suzuki S, Asakura H, Nagashima M, Sadamasu K, Yoshimura K, Yamamoto Y, Nagamoto T, Schreiber G, Maenaka K, Hashiguchi T, Ikeda T, Fukuhara T, Saito A, Tanaka S, Matsuno K, Takayama K, Sato K: “Virological characteristics of the SARS-CoV-2 XBB variant derived from recombination of two Omicron subvariants”, Nat Commun, 14(1):2800(2023)
  15. Suwanthada P, Kongsoi S, Miura N, Belotindos LP, Piantham C, Toyting J, Akapelwa ML, Pachanon R, Koide K, Kim H, Thapa J, Nakajima C, Suzuki Y: “The Impact of Substitutions at Positions 1 and 8 of Fluoroquinolones on the Activity Against Mutant DNA Gyrases of Salmonella Typhimurium”, Microb Drug Resist, 29(12):552-560(2023)
  16. Ogata S, Umemiya-Shirafuji R, Kusakisako K, Kakisaka K, Chatanga E, Hayashi N, Taya Y, Ohari Y, Pandey GS, Abdelbaset AE, Qiu Y, Matsuno K, Nonaka N, Nakao R: “Investigation of vertical and horizontal transmission of Spiroplasma in ticks under laboratory conditions”, Sci Rep, 13(1):13265(2023)
  17. Ogasawara K, Yamada N, Nakayama SM, Watanabe Y, Saito K, Chiba A, Uchida Y, Ueda K, Takenaka Y, Kazama K, Kazama M, Yamagishi J, Mizukawa H, Ikenaka Y, Ishizuka M: “Surveys of eleven species of wild and zoo birds and feeding experiments in white-tailed eagles reveal differences in the composition of the avian gut microbiome based on dietary habits between and within species”, J Vet Med Sci, 85(12):1355-1365(2023)
  18. Narongpun P, Chanchaithong P, Yamagishi J, Thapa J, Nakajima C, Suzuki Y: “Whole-Genome Investigation of Zoonotic Transmission of Livestock-Associated Methicillin-Resistant Staphylococcus aureus Clonal Complex 398 Isolated from Pigs and Humans in Thailand”, Antibiotics (Basel), 12(12)(2023)
  19. Kobayashi S, Kawakami R, Takeda C, Maezono K, Thammahakin P, Eguchi H, Hang’ombe BM, Orba Y, Sawa H, Yoshii K, Kariwa H: “Ubiquitin accumulation induced by the finger and palm sub-domains of NS5 modulates the replication of West Nile virus”, Virology, 588:109902(2023)
  20. Kapalamula TF, Thapa J, Hayashida K, Chizimu J, Tanomsridachchai W, Nyenje ME, Mkakosya R, Nakajima C, Suzuki Y: “Direct detection of Mycobacterium bovis by a dry loop-mediated isothermal amplification assay in cattle samples collected during routine abattoir examination in Malawi”, J Vet Diagn Invest, 35(3):307-310(2023)
  21. Itokawa K, Sato K, Qiu Y, Yamagishi J, Changula K, Kawai N, Hayashida K, Ndebe J, Hang’ombe BM, Sawa H, Kasai S, Akeda Y, Kawabata H: “Genome Sequence of a Clinical Isolate of the Human Pathogenic Strain “Candidatus Borrelia fainii” Qtaro”, Microbiol Resour Announc, 12(5):e0131822(2023)
  22. Ito J, Suzuki R, Uriu K, Itakura Y, Zahradnik J, Kimura KT, Deguchi S, Wang L, Lytras S, Tamura T, Kida I, Nasser H, Shofa M, Begum MM, Tsuda M, Oda Y, Suzuki T, Sasaki J, Sasaki-Tabata K, Fujita S, Yoshimatsu K, Ito H, Nao N, Asakura H, Nagashima M, Sadamasu K, Yoshimura K, Yamamoto Y, Nagamoto T, Kuramochi J, Schreiber G, Saito A, Matsuno K, Takayama K, Hashiguchi T, Tanaka S, Fukuhara T, Ikeda T, Sato K: “Convergent evolution of SARS-CoV-2 Omicron subvariants leading to the emergence of BQ.1.1 variant”, Nat Commun, 14(1):2671(2023)
  23. Huynh LT, Isoda N, Hew LY, Ogino S, Mimura Y, Kobayashi M, Kim T, Nishi T, Fukai K, Hiono T, Sakoda Y: “Generation and Efficacy of Two Chimeric Viruses Derived from GPE(-) Vaccine Strain as Classical Swine Fever Vaccine Candidates”, Viruses, 15(7)(2023)
  24. Harima H, Qiu Y, Yamagishi J, Kajihara M, Changula K, Okuya K, Isono M, Yamaguchi T, Ogawa H, Nao N, Sasaki M, Simulundu E, Mweene AS, Sawa H, Ishihara K, Hang’ombe BM, Takada A: “Surveillance, Isolation, and Genetic Characterization of Bat Herpesviruses in Zambia”, Viruses, 15(6)(2023)
  25. Damina SM, Barnes DA, Inuwa B, Ularamu GH, Bello M, Okaiyeto OS, Kudi AC, Thapa J, Nakajima C, Suzuki Y: “Molecular Characterisation of Mycobacterium bovis Isolates from Cattle Slaughtered in Adamawa and Gombe States, North-Eastern Nigeria”, Curr Issues Mol Biol, 45(7):6055-6066(2023)
  26. Chizimu JY, Solo ES, Bwalya P, Kapalamula TF, Mwale KK, Squarre D, Shawa M, Lungu P, Barnes DA, Yamba K, Mufune T, Chambaro H, Kamboyi H, Munyeme M, Hang’ombe BM, Kapata N, Mukonka V, Chilengi R, Thapa J, Nakajima C, Suzuki Y: “Genomic Analysis of Mycobacterium tuberculosis Strains Resistant to Second-Line Anti-Tuberculosis Drugs in Lusaka, Zambia”, Antibiotics (Basel), 12(7)(2023)
  27. Changula K, Kajihara M, Muramatsu S, Hiraoka K, Yamaguchi T, Yago Y, Kato D, Miyamoto H, Mori-Kajihara A, Shigeno A, Yoshida R, Henderson CW, Marzi A, Takada A: “Development of an Immunochromatography Assay to Detect Marburg Virus and Ravn Virus”, Viruses, 15(12)(2023)
  28. Yamagishi J, Ceylan O, Xuan X, Sevinc F: “Whole genome sequence and diversity in multigene families of Babesia ovis”, Front Cell Infect Microbiol, 13:1194608(2023)
  29. Ochi A, Kidaka T, Hakimi H, Asada M, Yamagishi J: “Chromosome-level genome assembly of Babesia caballi reveals diversity of multigene families among Babesia species”, BMC Genomics, 24(1):483(2023)

 

2) Other original papers：20

  1. Nagai K, Fujii W, Yamagishi J, Sanjoba C, Goto Y: “Inflammatory CD11b(+) Macrophages Produce BAFF in Spleen of Mice Infected with Leishmania donovani”, Pathogens,13(3):232 (2024)
  2. Hiono T, Sakaue H, Tomioka A, Kaji H, Sasaki M, Orba Y, Sawa H, Kuno A: “Combinatorial Approach with Mass Spectrometry and Lectin Microarray Dissected Site-Specific Glycostem and Glycoleaf Features of the Virion-Derived Spike Protein of Ancestral and γ Variant SARS-CoV-2 Strains”, J Proteome Res, 23(4):1408-1419(2024).
  3. Fukuda A, Nakajima C, Suzuki Y, Usui M: “Transferable linezolid resistance genes (optrA and poxtA) in enterococci derived from livestock compost at Japanese farms”, J Glob Antimicrob Resist, 36:336-344(2024)
  4. Shingai M, Iida S, Kawai N, Kawahara M, Sekiya T, Ohno M, Nomura N, Handabile C, Kawakita T, Omori R, Yamagishi J, Sano K, Ainai A, Suzuki T, Ohnishi K, Ito K, Kida H: “Extraction of the CDRH3 sequence of the mouse antibody repertoire selected upon influenza virus infection by subtraction of the background antibody repertoire”, J Virol, 98(3):e0199523(2024)
  5. Tamura T, Yamamoto H, Ogino S, Morioka Y, Tsujino S, Suzuki R, Hiono T, Suzuki S, Isoda N, Sakoda Y, Fukuhara T: “A rapid and versatile reverse genetics approach for generating recombinant positive-strand RNA viruses that use IRES-mediated translation”, J Virol, 98(3):e0163823(2024)
  6. Tsumita T, Takeda R, Maishi N, Hida Y, Sasaki M, Orba Y, Sato A, Toba S, Ito W, Teshirogi T, Sakurai Y, Iba T, Naito H, Ando H, Watanabe H, Mizuno A, Nakanishi T, Matsuda A, Zixiao R, Lee JW, Iimura T, Sawa H, Hida K: “Viral uptake and pathophysiology of the lung endothelial cells in age-associated severe SARS-CoV-2 infection models”, Aging cell, 23(2):e14050(2024)
  7. Deguchi T, Maekawa N, Konnai S, Owaki R, Hosoya K, Morishita K, Nakamura M, Okagawa T, Takeuchi H, Kim S, Kinoshita R, Tachibana Y, Yokokawa M, Takagi S, Kato Y, Suzuki Y, Murata S, Ohashi K: “Enhanced Systemic Antitumour Immunity by Hypofractionated Radiotherapy and Anti-PD-L1 Therapy in Dogs with Pulmonary Metastatic Oral Malignant Melanoma”, Cancers, 15(11) (2023)
  8. Fujita S, Uriu K, Pan L, Nao N, Tabata K, Kishimoto M, Itakura Y, Sawa H, Kida I, Tamura T, Fukuhara T, Ito J, Matsuno K, Sato K: “Impact of Imprinted Immunity Induced by mRNA Vaccination in an Experimental Animal Model”, J Infect Dis, 228(8):1060-1065(2023)
  9. Fukuzawa S, Sato T, Aoki K, Yamamoto S, Ogasawara N, Nakajima C, Suzuki Y, Horiuchi M, Takahashi S, Yokota SI: “High prevalence of colistin heteroresistance in specific species and lineages of Enterobacter cloacae complex derived from human clinical specimens”, Anno Clin Microbiol Antimicrob, 22(1):60(2023)
  10. Igarashi M, Hirokawa T, Takada A: “Structural and Energetic Basis for Differential Binding of Ebola and Marburg Virus Glycoproteins to a Bat-Derived Niemann-Pick C1 Protein”, J Infect Dis, 228(Suppl 7):S479-s487(2023)
  11. Ikehata M, Konnai S, Okagawa T, Abe K, Honma M, Kitamura T, Maekawa N, Suzuki Y, Murata S, Ohashi K: “In vitro evaluation of Lactiplantibacillus plantarum HOKKAIDO strain, effective lactic acid bacteria for calf diarrhea”, Front Vet Sci, 10:1145445(2023)
  12. Imajoh M, Yoshida S, Nonaka L, Fukushima Y, Nakajima C, Suzuki Y, Wada T: “Retrospective identification of pathogenic mycobacterial species in fish: Mycobacterium pseudoshottsii YM-3, isolated from a yellowtail fish in 1986 in Kochi, Japan”, Microbiol Resour Announc, 12(10):e0049823(2023)
  13. Maekawa N, Konnai S, Hosoya K, Kim S, Kinoshita R, Deguchi T, Owaki R, Tachibana Y, Yokokawa M, Takeuchi H, Kagawa Y, Takagi S, Ohta H, Kato Y, Yamamoto S, Yamamoto K, Suzuki Y, Okagawa T, Murata S, Ohashi K: “Safety and clinical efficacy of an anti-PD-L1 antibody (c4G12) in dogs with advanced malignant tumours”, PloS one, 18(10):e0291727(2023)
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