Publications　FY2020

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Publications

FY 2020

1) International collaborative papers (peer reviewed)

1.1) International collaborative papers co-authored with overseas affiliated universities：40

  1. Sadykov M, Mourier T, Guan Q, Pain A: “Short sequence motif dynamics in the SARS-CoV-2 genome suggest a role for cytosine deamination in CpG reduction”, J Mol Cell Biol, (2021) (Online ahead of print)
  2. Alasmari A, Houghton J, Greenwood B, Heymann D, Edwards P, Larson H, Assiri A, Ben-Rached F, Pain A, Behrens R, Bustinduy A: “Meningococcal carriage among Hajj pilgrims, risk factors for carriage and records of vaccination: a study of pilgrims to Mecca”, Trop Med Int Health, 26(4):453-461 (2021)
  3. El Hajj H, Hleihel R, El Sabban M, Bruneau J, Zaatari G, Cheminant M, Marcais A, Akkouche A, Hasegawa H, Hall W, De The H, Hermine O, Bazarbachi A: “Loss of interleukin-10 activates innate immunity to eradicate adult T-cell leukemia-initiating cells”, Haematologica, 106(5):1443-1456(2021) (Online ahead of print)
  4. Koutsakos M, Rowntree LC, Hensen L, Chua BY, van de Sandt CE, Habel JR, Zhang W, Jia X, Kedzierski L, Ashhurst TM, Putri GH, Marsh-Wakefield F, Read MN, Edwards DN, Clemens EB, Wong CY, Mordant FL, Juno JA, Amanat F, Audsley J, Holmes NE, Gordon CL, Smibert OC, Trubiano JA, Hughes CM, Catton M, Denholm JT, Tong SY, Doolan DL, Kotsimbos TC, Jackson DC, Krammer F, Godfrey DI, Chung AW, King NJ, Lewin SR, Wheatley AK, Kent SJ, Subbarao K, McMahon J, Thevarajan I, Nguyen TH, Cheng AC, Kedzierska K: “Integrated immune dynamics define correlates of COVID-19 severity and antibody responses”, Cell Rep Med:100208(2021)
  5. Koutsakos M, Sekiya T, Chua BY, Nguyen THO, Wheatley AK, Juno JA, Ohno M, Nomura N, Ohara Y, Nishimura T, Endo M, Suzuki S, Ishigaki H, Nakayama M, Nguyen CT, Itoh Y, Shingai M, Ogasawara K, Kino Y, Kent SJ, Jackson DC, Brown LE, Kida H, Kedzierska K: “Immune profiling of influenza-specific B- and T-cell responses in macaques using flow cytometry-based assays”, Immunol Cell Biol, 99(1):97-106(2021)
  6. Nomura N, Matsuno K, Shingai M, Ohno M, Sekiya T, Omori R, Sakoda Y, Webster RG, Kida H: “Updating the influenza virus library at Hokkaido University -It’s potential for the use of pandemic vaccine strain candidates and diagnosis”, Virology, 557:55-61(2021)
  7. Rampini S, Li P, Gandhi D, Mutas M, Ran YF, Carr M, Lee GU: “Design of micromagnetic arrays for on-chip separation of superparamagnetic bead aggregates and detection of a model protein and double-stranded DNA analytes”, Sci Rep, 11(1):5302(2021)
  8. Rowntree LC, Chua BY, Nicholson S, Koutsakos M, Hensen L, Douros C, Selva K, Mordant FL, Wong CY, Habel JR, Zhang W, Jia X, Allen L, Doolan DL, Jackson DC, Wheatley AK, Kent SJ, Amanat F, Krammer F, Subbarao K, Cheng AC, Chung AW, Catton M, Nguyen TH, van de Sandt CE, Kedzierska K: “Robust correlations across six SARS-CoV-2 serology assays detecting distinct antibody features”, Clin Transl Immunology, 10(3):e1258(2021)
  9. Harima H, Orba Y, Torii S, Qiu Y, Kajihara M, Eto Y, Matsuta N, Hang’ombe BM, Eshita Y, Uemura K, Matsuno K, Sasaki M, Yoshii K, Nakao R, Hall WW, Takada A, Abe T, Wolfinger MT, Simuunza M, Sawa H: “An African tick flavivirus forming an independent clade exhibits unique exoribonuclease-resistant RNA structures in the genomic 3′-untranslated region”, Sci Rep, 11(1):4883(2021)
  10. Kapalamula TF, Thapa J, Akapelwa ML, Hayashida K, Gordon SV, Hang’ Ombe BM, Munyeme M, Solo ES, Bwalya P, Nyenje ME, Tamaru A, Suzuki Y, Nakajima C: “Development of a loop-mediated isothermal amplification (LAMP) method for specific detection of Mycobacterium bovis”, PLoS Negl Trop Dis, 15(1):e0008996(2021)
  11. Kishimoto M, Uemura K, Sanaki T, Sato A, Hall WW, Kariwa H, Orba Y, Sawa H, Sasaki M: “TMPRSS11D and TMPRSS13 Activate the SARS-CoV-2 Spike Protein”, Viruses, 13(3):384 (2021)
  12. Kishimoto M, Hang’ombe BM, Hall WW, Orba Y, Sawa H, Sasaki M: ” Mastomys natalensis is a possible natural rodent reservoir for encephalomyocarditis virus”, J Gen Virol, 102(3) (2021)
  13. Orba Y, Matsuno K, Nakao R, Kryukov K, Saito Y, Kawamori F, Loza Vega A, Watanabe T, Maemura T, Sasaki M, Hall WW, Hall RA, Pereira JA, Nakagawa S, Sawa H: “Diverse mosquito-specific flaviviruses in the Bolivian Amazon basin”, J Gen Virol, 102(3) (2021)
  14. Sasaki M, Uemura K, Sato A, Toba S, Sanaki T, Maenaka K, Hall WW, Orba Y, Sawa H: “SARS-CoV-2 variants with mutations at the S1/S2 cleavage site are generated in vitro during propagation in TMPRSS2-deficient cells”, PLoS Pathog, 17(1):e1009233(2021)
  15. Uemura K, Sasaki M, Sanaki T, Toba S, Takahashi Y, Orba Y, Hall WW, Maenaka K, Sawa H, Sato A: “MRC5 cells engineered to express ACE2 serve as a model system for the discovery of antivirals targeting SARS-CoV-2”, Sci Rep, 11(1):5376(2021)
  16. Al-Rumhi A, Al-Hashami Z, Al-Hamidhi S, Gadalla A, Naeem R, Ranford-Cartwright L, Pain A, Sultan AA, Babiker HA: “Influx of diverse, drug resistant and transmissible Plasmodium falciparum into a malaria-free setting in Qatar”, BMC Infect Dis, 20(1):413(2020)
  17. Awad H, Gadalla AAH, Postigo M, Al-Hamidhi S, Tageldin MH, Skariah S, Sultan AA, Johnson EH, Shiels B, Pain A, Thompson J, Babiker HA: “Dynamics and within-host interaction of Theileria lestoquardi and T. ovis among naive sheep in Oman”, Sci Rep, 10(1):19802(2020)
  18. Barylyuk K, Koreny L, Ke H, Butterworth S, Crook OM, Lassadi I, Gupta V, Tromer E, Mourier T, Stevens TJ, Breckels LM, Pain A, Lilley KS, Waller RF: “A Comprehensive Subcellular Atlas of the Toxoplasma Proteome via hyperLOPIT Provides Spatial Context for Protein Functions”, Cell Host Microbe, 28(5):752-766.e9 (2020)
  19. Chambaro HM, Sasaki M, Sinkala Y, Gonzalez G, Squarre D, Fandamu P, Lubaba C, Mataa L, Shawa M, Mwape KE, Gabril S, Chembensofu M, Carr MJ, Hall WW, Qiu Y, Kajihara M, Takada A, Orba Y, Simulundu E, Sawa H: “Evidence for exposure of asymptomatic domestic pigs to African swine fever virus during an inter-epidemic period in Zambia”, Transbound Emerg Dis, 67(6):2741-2752 (2020).
  20. Freitas IT, Tinago W, Sawa H, McAndrews J, Doak B, Prior-Fuller C, Sheehan G, Lambert JS, Muldoon E, Cotter AG, Hall WW, Mallon PWG, Carr MJ: “Interferon lambda rs368234815 ΔG/ΔG is associated with higher CD4 :CD8+ T-cell ratio in treated HIV-1 infection”, AIDS Res Ther, 17(1):13(2020)
  21. Gallant J, Mouton J, Ummels R, Ten Hagen-Jongman C, Kriel N, Pain A, Warren RM, Bitter W, Heunis T, Sampson SL: “Identification of gene fusion events in”, NAR Genom Bioinform, 2(2):lqaa033(2020)
  22. Guan Q, Sadykov M, Mfarrej S, Hala S, Naeem R, Nugmanova R, Al-Omari A, Salih S, Mutair AA, Carr MJ, Hall WW, Arold ST, Pain A: “A genetic barcode of SARS-CoV-2 for monitoring global distribution of different clades during the COVID-19 pandemic”, Int J Infect Dis, 100:216-223(2020)
  23. Guttery DS, Ramaprasad A, Ferguson DJP, Zeeshan M, Pandey R, Brady D, Holder AA, Pain A, Tewari R: “MRE11 Is Crucial for Malaria Parasite Transmission and Its Absence Affects Expression of Interconnected Networks of Key Genes Essential for Life”, Cells, 9(12)(2020)
  24. Hala S, Chakkiath AP, Guan Q, Alshehri M, Alsaedi A, Alsharief A, Al-Amri A, Pain A: “Crohn’s Disease Patient Infected With Multiple Co-occurring Nontuberculous Mycobacteria”, Inflamm Bowel Dis,26(7):e65-e67(2020)
  25. Harima H, Sasaki M, Kajihara M, Gonzalez G, Simulundu E, Bwalya EC, Qiu Y, Okuya K, Isono M, Orba Y, Takada A, Hang’ombe BM, Mweene AS, Sawa H: “Characterization of mammalian orthoreoviruses isolated from faeces of pigs in Zambia”, J Gen Virol, 101(10):1027-1036(2020)
  26. Li P, Vassiliadis D, Ong SY, Bennett-Wood V, Sugimoto C, Yamagishi J, Hartland EL, Pasricha S: “Legionella pneumophila Infection Rewires the Acanthamoeba castellanii Transcriptome, Highlighting a Class of Sirtuin Genes “, Front Cell Infect Microbiol, 10:428(2020)
  27. Li Y, Quan C, Xing W, Wang P, Gao J, Zhang Z, Jiang X, Ma C, Carr MJ, He Q, Gao L, Bi Y, Tang H, Shi W: “Rapid humoral immune responses are required for recovery from haemorrhagic fever with renal syndrome patients”, Emerg Microbes Infect, 9(1):2303-2314(2020)
  28. Mourier T, Sadykov M, Carr MJ, Gonzalez G, Hall WW, Pain A: “Host-directed editing of the SARS-CoV-2 genome”, Biochem Biophys Res Commun, 538:35-39 (2020)
  29. Rchiad Z, Haidar M, Ansari HR, Tajeri S, Mfarrej S, Ben Rached F, Kaushik A, Langsley G, Pain A: “Novel tumour suppressor roles for GZMA and RASGRP1 in Theileria annulata-transformed macrophages and human B lymphoma cells”, Cell Microbiol:e13255(2020)
  30. Subudhi AK, O’Donnell AJ, Ramaprasad A, Abkallo HM, Kaushik A, Ansari HR, Abdel-Haleem AM, Ben Rached F, Kaneko O, Culleton R, Reece SE, Pain A: “Malaria parasites regulate intra-erythrocytic development duration via serpentine receptor 10 to coordinate with host rhythms”, Nat Commun, 11(1):2763(2020)
  31. Torii S, Orba Y, Sasaki M, Tabata K, Wada Y, Carr M, Hobson-Peters J, Hall RA, Takada A, Fukuhara T, Matsuura Y, Hall WW, Sawa H: “Host ESCRT factors are recruited during chikungunya virus infection and are required for the intracellular viral replication cycle”, J Biol Chem, 295(23):7941-7957(2020)
  32. Vidovszky MZ, Tan Z, Carr MJ, Boldogh S, Harrach B, Gonzalez G: “Bat-borne polyomaviruses in Europe reveal an evolutionary history of intrahost divergence with horseshoe bats distributed across the African and Eurasian continents”, J Gen Virol, 101(10):1119-1130(2020)
  33. Alam I, Kamau AA, Kulmanov M, Jaremko ü, Arold ST, Pain A, Gojobori T, Duarte CM: “Functional Pangenome Analysis Shows Key Features of E Protein Are Preserved in SARS and SARS-CoV-2”, Front Cell Infect Microbiol, 10:405(2020)
  34. Algaissi A, Alfaleh MA, Hala S, Abujamel TS, Alamri SS, Almahboub SA, Alluhaybi KA, Hobani HI, Alsulaiman RM, AlHarbi RH, ElAssouli MA, Alhabbab RY, AlSaieedi AA, Abdulaal WH, Al-Somali AA, Alofi FS, Khogeer AA, Alkayyal AA, Mahmoud AB, Almontashiri NAM, Pain A, Hashem AM: “SARS-CoV-2 S1 and N-based serological assays reveal rapid seroconversion and induction of specific antibody response in COVID-19 patients”, Sci Rep, 10(1):16561(2020)
  35. Chambaro HM, Sasaki M, Simulundu E, Silwamba I, Sinkala Y, Gonzalez G, Squarre D, Fandamu P, Lubaba CH, Munyeme M, Maseko A, Chimvwele C, Mataa L, Mooya LE, Mukubesa AN, Harima H, Samui KL, Munang’andu HM, Simuunza M, Nalubamba KS, Qiu Y, Carr MJ, Hall WW, Eshita Y, Sawa H, Orba Y: “Co-Circulation of Multiple Serotypes of Bluetongue Virus in Zambia”, Viruses, 12(9)(2020)
  36. Hashem AM, Algaissi A, Almahboub SA, Alfaleh MA, Abujamel TS, Alamri SS, Alluhaybi KA, Hobani HI, AlHarbi RH, Alsulaiman RM, ElAssouli MZ, Hala S, Alharbi NK, Alhabbab RY, AlSaieedi AA, Abdulaal WH, Bukhari A, Al-Somali AA, Alofi FS, Khogeer AA, Pain A, Alkayyal AA, Almontashiri NAM, Ahmad BM, Li X: “Early Humoral Response Correlates with Disease Severity and Outcomes in COVID-19 Patients”, Viruses, 12(12)(2020)
  37. Hashem AM, Alhabbab RY, Algaissi A, Alfaleh MA, Hala S, Abujamel TS, ElAssouli MZ, Al-Somali AA, Alofi FS, Khogeer AA, Alkayyal AA, Mahmoud AB, Almontashiri NAM, Pain A: “Performance of Commercially Available Rapid Serological Assays for the Detection of SARS-CoV-2 Antibodies”, Pathogens, 9(12)(2020)
  38. Nobori H, Uemura K, Toba S, Sanaki T, Shishido T, Hall WW, Orba Y, Sawa H, Sato A: “Identification of quinolone derivatives as effective anti-Dengue virus agents”, Antiviral Res, 184:104969(2020)
  39. Ohno M, Sekiya T, Nomura N, Daito TJ, Shingai M, Kida H: “Influenza virus infection affects insulin signaling, fatty acid-metabolizing enzyme expressions, and the tricarboxylic acid cycle in mice”, Sci Rep, 10(1):10879(2020)
  40. Wastika CE, Harima H, Sasaki M, Hang’ombe BM, Eshita Y, Qiu Y, Hall WW, Wolfinger MT, Sawa H, Orba Y: “Discoveries of Exoribonuclease-Resistant Structures of Insect-Specific Flaviviruses Isolated in Zambia”, Viruses, 12(9)(2020)

 

1.2) International collaborative papers：37

  1. Maharjan B, Thapa J, Shah DK, Shrestha B, Avsar K, Suzuki Y, Nakajima C: “Evaluation of Xpert MTB/RIF with microscopy and culture for the diagnosis of tuberculosis in a referral laboratory in Nepal”, Jpn J Infect Dis, (2021) (Online ahead of print)
  2. Takeda K, Ikenaka Y, Fourches D, Tanaka KD, Nakayama SMM, Triki D, Li X, Igarashi M, Tanikawa T, Ishizuka M: “The VKORC1 ER-luminal loop mutation (Leu76Pro) leads to a significant resistance to warfarin in black rats (Rattus rattus)”, Pestic Biochem Physiol, 173:104774(2021)
  3. Chonsin K, Supha N, Nakajima C, Suzuki Y, Suthienkul O: “Characterization of Vibrio parahaemolyticus strains isolated from clinically asymptomatic seafood workers”, FEMS Microbiol Lett, 368(1)(2021)
  4. Lombe BP, Miyamoto H, Saito T, Yoshida R, Manzoor R, Kajihara M, Shimojima M, Fukushi S, Morikawa S, Yoshikawa T, Kurosu T, Saijo M, Tang Q, Masumu J, Hawman D, Feldmann H, Takada A: “Purification of Crimean-Congo hemorrhagic fever virus nucleoprotein and its utility for serological diagnosis”, Sci Rep, 11(1):2324(2021)
  5. Twabela AT, Nguyen LT, Masumu J, Mpoyo P, Mpiana S, Sumbu J, Okamatsu M, Matsuno K, Isoda N, Zecchin B, Monne I, Sakoda Y: “A New Variant Among Newcastle Disease Viruses Isolated in the Democratic Republic of the Congo in 2018 and 2019”, Viruses, 13(2)(2021)
  6. Nakamura Y, Hayashida K, Delesalle V, Qiu Y, Omori R, Simuunza M, Sugimoto C, Namangala B, Yamagishi J: “Genetic Diversity of African Trypanosomes in Tsetse Flies and Cattle From the Kafue Ecosystem”, Front Vet Sci, 8:599815(2021)
  7. Tanomsridachchai W, Changkaew K, Changkwanyeun R, Prapasawat W, Intarapuk A, Fukushima Y, Yamasamit N, Flav Kapalamula T, Nakajima C, Suthienkul O, Suzuki Y: “Antimicrobial Resistance and Molecular Characterization of Methicillin-Resistant”, Antibiotics (Basel), 10(2)(2021)
  8. Tsunoda R, Usui M, Tagaki C, Fukuda A, Boonla C, Anomasiri W, Sukpanyatham N, Akapelwa ML, Nakajima C, Tamura Y, Suzuki Y: “Genetic characterization of coliform bacterial isolates from environmental water in Thailand”, J Infect Chemother, 27(5):722-728 (2021)
  9. Ogata S, Mohamed WMA, Kusakisako K, Thu MJ, Qiu Y, Moustafa MAM, Matsuno K, Katakura K, Nonaka N, Nakao R: “Infection among Ixodid Ticks Exhibits Species Dependence and Suggests a Vertical Pattern of Transmission”, Microorganisms, 9(2)(2021)
  10. Atarashi H, Jayasinghe WH, Kwon J, Kim H, Taninaka Y, Igarashi M, Ito K, Yamada T, Masuta C, Nakahara KS: “Artificially Edited Alleles of the Eukaryotic Translation Initiation Factor 4E1 Gene Differentially Reduce Susceptibility to Cucumber Mosaic Virus and Potato Virus Y in Tomato”, Front Microbiol, 11:564310(2020)
  11. Furuyama W, Nanbo A, Maruyama J, Marzi A, Takada A: “A complement component C1q-mediated mechanism of antibody-dependent enhancement of Ebola virus infection”, PLoS Negl Trop Dis, 14(9):e0008602(2020)
  12. Gulyaeva M, Huettmann F, Shestopalov A, Okamatsu M, Matsuno K, Chu DH, Sakoda Y, Glushchenko A, Milton E, Bortz E: “Data mining and model-predicting a global disease reservoir for low-pathogenic Avian Influenza (A) in the wider pacific rim using big data sets”, Sci Rep, 10(1):16817(2020)
  13. Isono M, Furuyama W, Kuroda M, Kondoh T, Igarashi M, Kajihara M, Yoshida R, Manzoor R, Okuya K, Miyamoto H, Feldmann H, Marzi A, Sakaitani M, Nanbo A, Takada A: “A biaryl sulfonamide derivative as a novel inhibitor of filovirus infection”, Antiviral Res, 183:104932(2020)
  14. Ito S, Bosch J, Jurado C, Sínchez-Vizcano JM, Isoda N: “Risk Assessment of African Swine Fever Virus Exposure to”, Pathogens, 9(4)(2020)
  15. Kalonda A, Saasa N, Nkhoma P, Kajihara M, Sawa H, Takada A, Simulundu E: “Avian Influenza Viruses Detected in Birds in Sub-Saharan Africa: A Systematic Review”, Viruses, 12(9)(2020)
  16. Kikutani Y, Okamatsu M, Nishihara S, Takase-Yoden S, Hiono T, de Vries RP, McBride R, Matsuno K, Kida H, Sakoda Y: “E190V substitution of H6 hemagglutinin is one of key factors for binding to sulfated sialylated glycan receptor and infection to chickens”, Microbiol Immunol, 64(4):304-312(2020)
  17. Kodera T, Yamaguchi T, Fukushima Y, Kobayashi K, Takarada Y, Chizimu JY, Nakajima C, Solo ES, Lungu PS, Kawase M, Suzuki Y: “Rapid and simple detection of isoniazid resistant Mycobacterium tuberculosis utilizing DNA chromatography based technique”, Jpn J Infect Dis, (2020) (Online ahead of print)
  18. Matsubayashi M, Shibahara T, Matsuo T, Hatabu T, Yamagishi J, Sasai K, Isobe T: “Morphological and molecular identification of Eimeria spp. in breeding chicken farms of Japan”, J Vet Med Sci, 82(5):516-519(2020)
  19. Nguyen LT, Stevenson MA, Firestone SM, Sims LD, Chu DH, Nguyen LV, Nguyen TN, Le KT, Isoda N, Matsuno K, Okamatsu M, Kida H, Sakoda Y: “Spatiotemporal and risk analysis of H5 highly pathogenic avian influenza in Vietnam, 2014-2017”, Prev Vet Med, 178:104678(2020)
  20. Pachanon R, Koide K, Kongsoi S, Nakajima C, Kapalamula TF, Suthienkul O, Suzuki Y: “Interaction of the plasmid-encoded quinolone resistance protein QnrB19 with Salmonella Typhimurium DNA gyrase”, J Infect Chemother, 26(11):1139-1145(2020)
  21. Phetsuksiri B, Klayut W, Rudeeaneksin J, Srisungngam S, Bunchoo S, Toonkomdang S, Wongchai T, Nakajima C, Suzuki Y: “The performance of an in-house loop-mediated isothermal amplification for the rapid detection of Mycobacterium tuberculosis in sputum samples in comparison with Xpert MTB/RIF, microscopy and culture”, Rev Inst Med Trop Sao Paulo, 62:e36(2020)
  22. Qiu Y, Kajihara M, Nakao R, Mulenga E, Harima H, Hang’ombe BM, Eto Y, Changula K, Mwizabi D, Sawa H, Higashi H, Mweene A, Takada A, Simuunza M, Sugimoto C: ” Isolation of Candidatus Bartonella rousetti and Other Bat-associated Bartonellae from Bats and Their Flies in Zambia”, Pathogens, 9 (6) (2020)
  23. Runtuwene LR, Kawashima S, Pijoh VD, Tuda JSB, Hayashida K, Yamagishi J, Sugimoto C, Nishiyama S, Sasaki M, Orba Y, Sawa H, Takasaki T, James AA, Kobayashi T, Eshita Y: ” The Lethal (2)-Essential-for-Life [ L(2)EFL] Gene Family Modulates Dengue Virus Infection in Aedes aegypti “, Int J Mol Sci, 21(20)(2020)
  24. Saito T, Maruyama J, Nagata N, Isono M, Okuya K, Takadate Y, Kida Y, Miyamoto H, Mori-Kajihara A, Hattori T, Furuyama W, Ogawa S, Iida S, Takada A: “A Surrogate Animal Model for Screening of Ebola and Marburg Glycoprotein-Targeting Drugs Using Pseudotyped Vesicular Stomatitis Viruses”, Viruses, 12(9)(2020)
  25. Shrestha D, Maharjan B, Thida Oo NA, Isoda N, Nakajima C, Suzuki Y: “Molecular analysis of streptomycin-resistance associating genes in Mycobacterium tuberculosis isolates from Nepal”, Tuberculosis (Edinb), 125:101985(2020)
  26. Squarre D, Hayashida K, Gaithuma A, Chambaro H, Kawai N, Moonga L, Namangala B, Sugimoto C, Yamagishi J: “Diversity of trypanosomes in wildlife of the Kafue ecosystem, Zambia”, Int J Parasitol Parasites Wildl, 12:34-41(2020)
  27. Suzuki A, Sawada K, Yamasaki T, Denkers ND, Mathiason CK, Hoover EA, Horiuchi M: “Involvement of N- and C-terminal region of recombinant cervid prion protein in its reactivity to CWD and atypical BSE prions in real-time quaking-induced conversion reaction in the presence of high concentrations of tissue homogenates”, Prion, 14(1):283-295(2020)
  28. Ulaankhuu A, Bazarragchaa E, Okamatsu M, Hiono T, Bodisaikhan K, Amartuvshin T, Tserenjav J, Urangoo T, Buyantogtokh K, Matsuno K, Hattori T, Kondoh T, Sato M, Takadate Y, Torii S, Isono M, Okuya K, Saito T, Kasajima N, Kida Y, Maruyama J, Igarashi M, Takada A, Kida H, Batchuluun D, Sakoda Y: “Genetic and antigenic characterization of H5 and H7 avian influenza viruses isolated from migratory waterfowl in Mongolia from 2017 to 2019”, Virus Genes, 56(4):472-479(2020)
  29. Hayashida K, Nambala P, Reet NV, Bscher P, Kawai N, Mutengo MM, Musaya J, Namangala B, Sugimoto C, Yamagishi J: “Development of a bio-inkjet printed LAMP test kit for detecting human African trypanosomiasis”, PLoS Negl Trop Dis, 14(10):e0008753(2020)
  30. Marsela M, Hayashida K, Nakao R, Chatanga E, Gaithuma AK, Naoko K, Musaya J, Sugimoto C, Yamagishi J: “Molecular identification of trypanosomes in cattle in Malawi using PCR methods and nanopore sequencing: epidemiological implications for the control of human and animal trypanosomiases”, Parasite, 27:46(2020)
  31. Mendoza CA, Yamaoka S, Tsuda Y, Matsuno K, Weisend CM, Ebihara H: “The NF-B inhibitor, SC75741, is a novel antiviral against emerging tick-borne bandaviruses”, Antiviral Res:104993(2020)
  32. Mulunda NR, Hayashida K, Yamagishi J, Sianongo S, Munsaka G, Sugimoto C, Mutengo MM: “Molecular characterization of Cryptosporidium spp. from patients with diarrhoea in Lusaka, Zambia”, Parasite, 27:53(2020)
  33. Nakao R, Shinjo K, Sakiyama T, Ogata S, Kusakisako K, Kinoshita G, Naguib D, Chatanga E, Mohamed WMA, Moustafa MAM, Matsuno K, Ito T, Nonaka N, Sashika M, Tsubota T, Shimozuru M: “Amblyomma testudinarium infestation on a brown bear (Ursus arctos yesoensis) captured in Hokkaido, a northern island of Japan”, Parasitol Int:102209(2020)
  34. Rudeeaneksin J, Phetsuksiri B, Nakajima C, Bunchoo S, Suthum K, Tipkrua N, Fukushima Y, Suzuki Y: “Drug-resistant Mycobacterium tuberculosis and its genotypes isolated from an outbreak in western Thailand”, Trans R Soc Trop Med Hyg, (2020) (Online ahead of print)
  35. Solo ES, Suzuki Y, Kaile T, Bwalya P, Lungu P, Chizimu JY, Shah Y, Nakajima C: “Characterization of Mycobacterium tuberculosis genotypes and their correlation to multidrug resistance in Lusaka, Zambia”, Int J Infect Dis,102:489-496 (2020)
  36. Squarre D, Nakamura Y, Hayashida K, Kawai N, Chambaro H, Namangala B, Sugimoto C, Yamagishi J: “Investigation of the piroplasm diversity circulating in wildlife and cattle of the greater Kafue ecosystem, Zambia”, Parasit Vectors, 13(1):599(2020)
  37. Twabela A, Okamatsu M, Matsuno K, Isoda N, Sakoda Y: “Evaluation of Baloxavir Marboxil and Peramivir for the Treatment of High Pathogenicity Avian Influenza in Chickens”, Viruses, 12(12)(2020)

 

2) Other original papers：26

  1. Sasaki M, Itakura Y, Kishimoto M, Tabata K, Uemura K, Ito N, Sugiyama M, Wastika CE, Orba Y, Sawa H: “Host serine proteases TMPRSS2 and TMPRSS11D mediate proteolytic activation and trypsin-independent infection in group A rotaviruses”, J Virol, (2021) (Online ahead of print)
  2. Yamaya M, Shimotai Y, Ohkawara A, Bazarragchaa E, Okamatsu M, Sakoda Y, Kida H, Nishimura H: “The clinically used serine protease inhibitor nafamostat reduces influenza virus replication and cytokine production in human airway epithelial cells and viral replication in mice”, J Med Virol, 93(6):3484-3495(2021)
  3. Maekawa N, Konnai S, Nishimura M, Kagawa Y, Takagi S, Hosoya K, Ohta H, Kim S, Okagawa T, Izumi Y, Deguchi T, Kato Y, Yamamoto S, Yamamoto K, Toda M, Nakajima C, Suzuki Y, Murata S, Ohashi K: “PD-L1 immunohistochemistry for canine cancers and clinical benefit of anti-PD-L1 antibody in dogs with pulmonary metastatic oral malignant melanoma”, NPJ Precis Oncol, 5(1):10(2021)
  4. Suzuki S, Nguyen CT, Ogata-Nakahara A, Shibata A, Osaka H, Ishigaki H, Okamatsu M, Sakoda Y, Kida H, Ogasawara K, Itoh Y: “Efficacy of a Cap-Dependent Endonuclease Inhibitor and Neuraminidase Inhibitors against H7N9 Highly Pathogenic Avian Influenza Virus Causing Severe Viral Pneumonia in Cynomolgus Macaques”, Antimicrob Agents Chemother, 65(3)(2021)
  5. Bazarragchaa E, Isoda N, Kim T, Tetsuo M, Ito S, Matsuno K, Sakoda Y: “Efficacy of Oral Vaccine against Classical Swine Fever in Wild Boar and Estimation of the Disease Dynamics in the Quantitative Approach”, Viruses, 13(2)(2021)
  6. Goto Y, Kuroki A, Suzuki K, Yamagishi J: “Draft Genome Sequence of Leishmania tarentolae Parrot Tar II, Obtained by Single-Molecule Real-Time Sequencing”, Microbiol Resour Announc, 9(21)(2020)
  7. Hayashi H, Okamatsu M, Ogasawara H, Tsugawa N, Isoda N, Matsuno K, Sakoda Y: “Oral Supplementation of the Vitamin D Metabolite 25(OH)D”, Nutrients, 12(7)(2020)
  8. Hiyama Y, Sato T, Takahashi S, Yamamoto S, Fukushima Y, Nakajima C, Suzuki Y, Yokota SI, Masumori N: “Sitafloxacin has a potent activity for eradication of extended spectrum-lactamase-producing fluoroquinolone-resistant Escherichia coli forming intracellular bacterial communities in uroepithelial cells”, J Infect Chemother, 26(12):1272-1277(2020)
  9. Kobayashi S, Kaneko C, Kawakami R, Hasebe R, Sawa H, Yoshii K, Kariwa H: “Amino acid 159 of the envelope protein affects viral replication and T-cell infiltration by West Nile virus in intracranial infection”, Sci Rep, 10(1):7168(2020)
  10. Manzoor R, Eguchi N, Yoshida R, Ozaki H, Kondoh T, Okuya K, Miyamoto H, Takada A: “A novel mechanism underlying antiviral activity of an influenza virus M2-specific antibody”, J Virol, 95(1):e01277-20 (2020)
  11. Nguyen CT, Suzuki S, Itoh Y, Ishigaki H, Nakayama M, Hayashi K, Matsuno K, Okamatsu M, Sakoda Y, Kida H, Ogasawara K: “Efficacy of Neuraminidase Inhibitors against H5N6 Highly Pathogenic Avian Influenza Virus in a Nonhuman Primate Model”, Antimicrob Agents Chemother, 64(7)(2020)
  12. Okuya K, Eguchi N, Manzoor R, Yoshida R, Saito S, Suzuki T, Sasaki M, Saito T, Kida Y, Mori-Kajihara A, Miyamoto H, Ichii O, Kajihara M, Higashi H, Takada A: “Comparative Analyses of the Antiviral Activities of IgG and IgA Antibodies to Influenza A Virus M2 Protein”, Viruses, 12(7)(2020)
  13. Okuya K, Yoshida R, Manzoor R, Saito S, Suzuki T, Sasaki M, Saito T, Kida Y, Mori-Kajihara A, Kondoh T, Sato M, Kajihara M, Miyamoto H, Ichii O, Higashi H, Takada A: “Potential Role of Nonneutralizing IgA Antibodies in Cross-Protective Immunity against Influenza A Viruses of Multiple Hemagglutinin Subtypes”, J Virol, 94(12)(2020)
  14. Park JH, Yamaguchi T, Ouchi Y, Koide K, Mori S, Kim H, Mukai T, Nakajima C, Suzuki Y: “WQ-3810 inhibits DNA gyrase activity in ofloxacin-resistant Mycobacterium leprae”, J Infect Chemother, 26(4):335-342(2020)
  15. Sato T, Wada T, Shinagawa M, Fukushima Y, Nakajima C, Suzuki Y, Takahashi S, Yokota SI: “Emergence of vancomycin- and teicoplanin-resistant Enterococcus faecium via vanD5-harbouring large genomic island”, J Antimicrob Chemother, 75(9):2411-2415(2020)
  16. Suzuki S, Shichinohe S, Itoh Y, Nakayama M, Ishigaki H, Mori Y, Ogata-Nakahara A, Nguyen CT, Okamatsu M, Sakoda Y, Kida H, Ogasawara K: “Low replicative fitness of neuraminidase inhibitor-resistant H7N9 avian influenza a virus with R292K substitution in neuraminidase in cynomolgus macaques compared with I222T substitution”, Antiviral Res, 178:104790(2020)
  17. Suzuki Y, Sato T, Fukushima Y, Nakajima C, Suzuki Y, Takahashi S, Yokota SI: ” Contribution of β-lactamase and efflux pump overproduction to tazobactam-piperacillin resistance in clinical isolates of Escherichia coli”, Int J Antimicrob Agents, 55(4):105919(2020)
  18. Takadate Y, Manzoor R, Saito T, Kida Y, Maruyama J, Kondoh T, Miyamoto H, Ogawa H, Kajihara M, Igarashi M, Takada A: “Receptor-Mediated Host Cell Preference of a Bat-Derived Filovirus, Lloviu Virus”, Microorganisms, 8(10)(2020)
  19. Takarada Y, Kodera T, Kobayashi K, Nakajima C, Kawase M, Suzuki Y: “Rapid detection of rifampicin-resistant Mycobacterium tuberculosis, based on isothermal DNA amplification and DNA chromatography”, J Microbiol Methods, 177:106062(2020)
  20. Tanaka M, Yamasaki T, Hasebe R, Suzuki A, Horiuchi M: “Enhanced phosphorylation of PERK in primary cultured neurons as an autonomous neuronal response to prion infection”, PLoS One, 15(6):e0234147(2020)
  21. Terasawa Y, Sataka C, Sato T, Yamamoto K, Fukushima Y, Nakajima C, Suzuki Y, Katsuyama A, Matsumaru T, Yakushiji F, Yokota SI, Ichikawa S: “Elucidating the Structural Requirement of Uridylpeptide Antibiotics for Antibacterial Activity”, J Med Chem, 63(17):9803-9827(2020)
  22. Fujiki J, Furusawa T, Munby M, Kawaguchi C, Matsuda Y, Shiokura Y, Nakamura K, Nakamura T, Sasaki M, Usui M, Iwasaki T, Gondaira S, Higuchi H, Sawa H, Tamura Y, Iwano H: “Susceptibility of Pseudomonas aeruginosa veterinary isolates to Pbunavirus PB1-like phages”, Microbiol Immunol, 64(11):778-782 (2020)
  23. Hakimi H, Templeton TJ, Sakaguchi M, Yamagishi J, Miyazaki S, Yahata K, Uchihashi T, Kawazu SI, Kaneko O, Asada M: “Novel Babesia bovis exported proteins that modify properties of infected red blood cells”, PLoS Pathog, 16(10): e1008917(2020)
  24. Hayashi H, Isoda N, Bazarragchaa E, Nomura N, Matsuno K, Okamatsu M, Kida H, Sakoda Y: “Potency of an Inactivated Influenza Vaccine against a Challenge with A/Swine/Missouri/A01727926/2015 (H4N6) in Mice for Pandemic Preparedness”, Vaccines (Basel), 8(4)(2020)
  25. Isoda N, Twabela AT, Bazarragchaa E, Ogasawara K, Hayashi H, Wang ZJ, Kobayashi D, Watanabe Y, Saito K, Kida H, Sakoda Y: “Re-Invasion of H5N8 High Pathogenicity Avian Influenza Virus Clade 2.3.4.4b in Hokkaido, Japan, 2020”, Viruses, 12(12)(2020)
  26. Munby M, Fujiki J, Aoki K, Kawaguchi C, Nakamura K, Nakamura T, Sasaki M, Sato T, Usui M, Sawa H, Yokota SI, Tamura Y, Iwano H: “Whole-Genome Sequence of Fluoroquinolone-Resistant Escherichia coli HUE1, Isolated in Hokkaido, Japan”, Microbiol Resour Announc, 9(46)(2020)