{"id":1103,"date":"2016-09-28T11:12:47","date_gmt":"2016-09-28T02:12:47","guid":{"rendered":"http:\/\/demo3.kxk.co.jp\/gsz2\/?page_id=1103"},"modified":"2022-01-11T13:22:17","modified_gmt":"2022-01-11T04:22:17","slug":"publications2015","status":"publish","type":"page","link":"https:\/\/c-mng.cwh.hokudai.ac.jp\/gicore-icu.czc\/Root\/publications2015.html","title":{"rendered":"Publications\u3000FY2015"},"content":{"rendered":"

Publications<\/h1>\n

FY 2015<\/h2>\n

1) International collaborative papers (peer reviewed)<\/p>\n

1.1) International collaborative papers co-authored with overseas affiliated universities\u30004<\/p>\n

\u00a0 \u00a0 \u00a0 \u00a0i) Papers where “GI-CoRE” is stated as an affiliated institution<\/p>\n

\u00a0 \u00a0 \u00a0 ii) Papers which mention “Hokkaido University” in the acknowledgements.<\/p>\n

    \n
  1. Chua BY<\/u>, Wong CY,\u00a0Mifsud EJ<\/u>, Edenborough KM, Sekiya T, Tan AC, Mercuri F, Rockman S, Chen W, Turner SJ, Doherty PC, Kelso A,\u00a0Brown LE<\/u>,\u00a0Jackson DC<\/u>: \u201cInactivated influenza vaccine that provides rapid, innate-immune-system-mediated protection and subsequent long-term adaptive immunity\u201d, MBio<\/b>,6(6). Pii,e01024-15 (2015) i\uff09<\/li>\n
  2. Gornik SG, Febrimarsa, Cassin AM, MacRae JI, Ramaprasad A, Rchiad Z, McConville MJ, Bacic A, McFadden GI,\u00a0Pain A,<\/u> Waller RF : \u201cEndosymbiosis\u00a0undone by stepwise elimination of the plastid in a parasitic dinoflagellate\u201d, Proc Natl Acad Sci U S A<\/b>, 112(18),5767-72(2015) i\uff09<\/li>\n
  3. Assefa S, Lim C, Preston MD, Duffy CW, Nair MB, Adroub SA, Kadir KA, Goldberg JM, Neafsey DE, Divis P, Clark TG, Duraisingh MT, Conway DJ,Pain A<\/u>, Singh B: \u201cPopulation genomic structure and adaptation in the zoonotic malaria parasite Plasmodium knowlesi<\/em>\u201d, Proc Natl Acad Sci U S A<\/b>, 112(42),13027-32(2015) i\uff09<\/li>\n
  4. Abdallah AM, Hill-Cawthorne GA, Otto TD, Coll F, Guerra-Assun\u00e7\u00e3o JA, Gao G, Naeem R, Ansari H, Malas TB, Adroub SA, Verboom T, Ummels R, Zhang H, Panigrahi AK, McNerney R, Brosch R, Clark TG, Behr MA, Bitter W, Pain A<\/u>: \u201cGenomic expression catalogue of a global collection of BCG vaccine strains show evidence for highly diverged metabolic and cell-wall adaptations.\u201d.Sci Rep<\/b>, 5:15443. doi: 10.1038\/srep15443(2015) i\uff09<\/li>\n<\/ol>\n

     <\/p>\n

    1.2) International collaborative papers\u300020<\/p>\n

    \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 i) Papers where “GI-CoRE” is stated as an affiliated institution<\/p>\n

    \u00a0 \u00a0 \u00a0 \u00a0 \u00a0ii) Papers which mention “Hokkaido University” in the acknowledgements.<\/p>\n

      \n
    1. Hiono T, Okamatsu M,\u00a0Igarashi M<\/u>, McBride R, de Vries RP, Peng W, Paulson JC,\u00a0Sakoda Y<\/u>, Kida H<\/u>:\u201cAmino acid residues at positions 222 and 227 of the hemagglutinin together with the neuraminidase determine binding of H5 avian influenza viruses to sialyl Lewis X\u201d, Arch Virol<\/b>, 161, 307-16, (2016) i\uff09<\/li>\n
    2. Furuyama W, Marzi A, Nanbo A, Haddock E, Maruyama J, Miyamoto H, Igarashi M<\/u>, Yoshida R, Noyori O, Feldmann H, Takada A<\/u>: \u201cDiscovery of an antibody for pan-ebolavirus therapy\u201d, Sci Rep<\/b>, 6 ,20514 (2016) i\uff09<\/li>\n
    3. Maruyama J, Nao N, Miyamoto H, Maeda K, Ogawa H, Yoshida R, Igarashi M<\/u>,Takada A<\/u>: \u201cCharacterization of the glycoproteins of bat-derived influenza viruses\u201d, Virology<\/b>, 488, 43-50 (2016) i\uff09<\/li>\n
    4. Khin Saw Aye, Nakajima C<\/u>, Yamaguchi T, Min Min Win, Mu Mu Shwe, Aye Aye Win, Thandar Lwin, Wint Wint Nyunt, Ti Ti, Suzuki Y<\/u> : \u201cGenotypic characterization of multi-drug-resistant Mycobacterium tuberculosis<\/em> isolates in Myanmar.\u201d, J Infect Chemother<\/b>, 22(3),174-9 (2016) i) ii)<\/li>\n
    5. Diab HM, Nakajima C<\/u>, Kotb SA, Mokhtar A, Khder NFM, Abdelaal ASA, Hegazy A, Poudel A, Shah Y, Suzuki Y<\/u> : \u201cFirst insight into the genetic population structure of Mycobacterium tuberculosis<\/em> isolated from pulmonary tuberculosis patients in Egypt.\u201d, Tuberculosis<\/b>, 96,13-20 (2016) i) ii)<\/li>\n
    6. Thapa J, Paudel S, Sadaula A, Shah Y, Maharjan B, Kaufman GE, McCauley D, Gairhe KP, Tsubota T, Suzuki Y<\/u>, Nakajima C<\/u>: \u201cMycobacterium orygis<\/em>\u2013associated tuberculosis in free-ranging rhinoceros, Nepal\u201d, Emerg Infect Dis<\/b>, 22(3): 570\u20132 (2016) i)<\/li>\n
    7. Villanueva MA, Mingala CN, Gloriani NG, Yanagihara Y, Isoda N, Nakajima C<\/u>, Suzuki Y<\/u>, Koizumi N: \u201cSerological investigation of Leptospira infection and its circulation in one intensive-type water buffalo farm in the Philippines\u201d, Jpn J Vet Res<\/b>, 64(1), 15-24 (2016) i)<\/li>\n
    8. Qiu Y, Nakao R, Thu MJ, Akter S, Alam MZ, Kato S, Katakura K,Sugimoto C<\/u>: \u201cMolecular evidence of spotted fever group Rickettsiae and Anaplasmataceae from ticks and stray dogs in Bangladesh\u201d, Parasitol Res<\/b>, 115(3), 949-55 (2016) i)<\/li>\n
    9. Tamura T, Ruggli N, Nagashima N, Okamatsu M,\u00a0Igarashi M<\/u>, Mine J, Hofmann MA, Liniger M, Summerfield A,\u00a0Kida H<\/u>,\u00a0Sakoda Y<\/u>: \u201cIntracellular membrane association of the N-terminal domain of classical swine fever virus NS4B determines viral genome replication and virulence\u201d, J Gen Virol<\/b>, 96(9), 2623-35 (2015) i)<\/li>\n
    10. Hiono T, Ohkawara A, Ogasawara K, Okamatsu M, Tamura T, Chu DH, Suzuki M, Kuribayashi S, Shichinohe S,\u00a0Takada A<\/u>, Ogawa H, Yoshida R, Miyamoto H, Nao N, Furuyama W, Maruyama J, Eguchi N, Ulziibat G, Enkhbold B, Shatar M, Jargalsaikhan T, Byambadorj S, Damdinjav B, Sakoda Y<\/u>,\u00a0Kida H<\/u>: \u201c Genetic and antigenic characterization of H5 and H7 influenza viruses isolated from migratory water birds in Hokkaido, Japan and Mongolia from 2010 to 2014\u201d, Virus Genes<\/b>, 51(1), 57-68 (2015) i)<\/li>\n
    11. Mine J, Tamura T, Mitsuhashi K, Okamatsu M, Parchariyanon S, Pinyochon W, Ruggli N, Tratschin JD,\u00a0Kida H<\/u>,\u00a0Sakoda Y<\/u>: \u201cThe N-terminal domain of Npro of classical swine fever virus determines its stability and regulates type I IFN production\u201d, J Gen Virol<\/b>, 96(Pt 7), 1746-56 (2015) i)<\/li>\n
    12. Nao N, Kajihara M, Manzoor R, Maruyama J, Yoshida R, Muramatsu M, Miyamoto H,\u00a0Igarashi M<\/u>, Eguchi N, Sato M, Kondoh T, Okamatsu M, Sakoda Y<\/u>,\u00a0Kida H<\/u>,\u00a0Takada A<\/u>: \u201cA single amino acid in the M1 protein responsible for the different pathogenic potentials of H5N1 highly pathogenic avian influenza virus strains\u201d, PLoS One<\/b>, 10(9), e0137989 (2015) i)<\/li>\n
    13. Ogawa H, Koizumi N, Ohnuma A, Mutemwa A, Hang\u2019ombe BM, Mweene AS,\u00a0Takada A<\/u>, Sugimoto C<\/u>,\u00a0Suzuki Y<\/u>,\u00a0Kida H<\/u>,\u00a0Sawa H<\/u>: \u201cMolecular epidemiology of pathogenic Leptospira spp. in the straw-colored fruit bat (Eidolon helvum<\/em>) migrating to Zambia from the Democratic Republic of Congo\u201d, Infect Genet Evol<\/b>, 32, 143-7 (2015) i) ii)<\/li>\n
    14. Ogawa H, Miyamoto H, Nakayama E, Yoshida R, Nakamura I, Sawa H<\/u>, Ishii A, Thomas Y, Nakagawa E,\u00a0Matsuno K<\/u>, Kajihara M, Maruyama J, Nao N, Muramatsu M, Kuroda M, Simulundu E, Changula K, Hang\u2019ombe B, Namangala B, Nambota A, Katampi J,\u00a0Igarashi M<\/u>,\u00a0Ito K<\/u>, Feldmann H,\u00a0Sugimoto C<\/u>, Moonga L, Mweene A,\u00a0Takada A<\/u>: \u201cSeroepidemiological prevalence of multiple species of filoviruses in fruit bats (Eidolon helvum<\/em>) migrating in Africa\u201d, J Infect Dis<\/b>, 212 Suppl 2, S101-8\u00a0(2015) i) ii)<\/li>\n
    15. Kuroda M, Fujikura D, Nanbo A, Marzi A, Noyori O, Kajihara M, Maruyama J,\u00a0Matsuno K<\/u>, Miyamoto H, Yoshida R, Feldmann H,\u00a0Takada A<\/u>: \u201cInteraction between TIM-1 and NPC1 is important for cellular entry of ebola virus\u201d, J Virol<\/b>\n
    16. Sasaki M, Orba Y, Anindita PD, Ishii A, Ueno K, Hang\u2019ombe BM, Mweene AS, Ito K<\/u>, Sawa H<\/u>: \u201cDistinct lineages of bufavirus in wild shrews and nonhuman primates.\u201d, Emerg Infect Dis<\/b>, ;21(7),1230-3(2015) ii)<\/li>\n
    17. Anindita PD, Sasaki M, Setiyono A, Handharyani E, Orba Y, Kobayashi S, Rahmadani I, Taha S, Adiani S, Subangkit M, Nakamura I, Sawa H<\/u>, Kimura T: \u201cDetection of coronavirus genomes in Moluccan naked-backed fruit bats in Indonesia\u201d, Arch Virol<\/b>,160(4), 1113-8 (2015) i) ii)<\/li>\n
    18. Kongsoi S, Yokoyama K, Suprasert A, Utrarachkij F,\u00a0Nakajima C<\/u>, Suthienkul O,\u00a0Suzuki Y<\/u>: \u201cCharacterization of Salmonella<\/em> Typhimurium DNA gyrase as a target of quinolones\u201d,\u00a0Drug Test Anal<\/b>, 7(8), 714-20 (2015) i)<\/li>\n
    19. Changkwanyeun R, Usui M, Kongsoi S, Yokoyama K, Kim H, Suthienkul O, Changkaew K, Nakajima C<\/u>, Tamura Y,\u00a0Suzuki Y<\/u>: \u201cCharacterization of Campylobacter jejuni<\/em> DNA gyrase as the target of quinolones\u201d, J Infect Chemother<\/b>, 21(8), 604-9 (2015) i)<\/li>\n
    20. Changkaew K, Intarapuk A, Utrarachkij F,\u00a0Nakajima C<\/u>, Suthienkul O,\u00a0Suzuki Y<\/u> : \u201cAntimicrobial resistance, extended-spectrum \u03b2-lactamase productivity, and class 1 integrons in Escherichia coli <\/em>from healthy swine\u201d, J Food Prot<\/b>, 78(8), 1442-50 (2015) i) ii)<\/li>\n<\/ol>\n

       <\/p>\n

      2) Other original papers\u300011<\/p>\n

      \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 i) Papers where “GI-CoRE” is stated as an affiliated institution<\/p>\n

      \u00a0 \u00a0 \u00a0 \u00a0 \u00a0ii) Papers which mention “Hokkaido University” in the acknowledgements.<\/p>\n

        \n
      1. Oshiumi H<\/u>,<\/strong>Mifsud EJ<\/u>, Daito T: \u201c<\/strong>Links between recognition and degradation of cytoplasmic viral RNA in innate immune response\u201d, Rev Med Virol<\/strong>, 26(2), 90-101(2016) i) ii)<\/li>\n
      2. Hakimi H,\u00a0Yamagishi J<\/u>, Kegawa Y, Kaneko O, Kawazu S, Asada M: \u201cEstablishment of transient and stable transfection systems for Babesia ovata\u201d, Parasit Vectors<\/b>, 9, 171 (2016) i)<\/li>\n
      3. Gamoh K, Nakamizo M, Okamatsu M, Sakoda Y<\/u>,Kida\u00a0H<\/u>, Suzuki S<\/u>: \u201c Protective\u00a0efficacy\u00a0of stockpiled vaccine against H5N8 highly pathogenic avian influenza virus isolated from a chicken in Kumamoto prefecture, Japan, in 2014\u201d, J Vet Med Sci<\/b>, 1;78(1), 139-42 (2016) i)<\/li>\n
      4. Kobayashi S, Suzuki T, Kawaguchi A, Phongphaew W, Yoshii K, Iwano T, Harada A, Kariwa H, Orba Y, Sawa H<\/u>: \u201cRab8b regulates transport of West Nile virus particles from recycling endosomes.\u201d, J Biol Chem<\/b>, 291(12), 6559-68 (2016) i)<\/li>\n
      5. Abe Y, Tamura T, Torii S, Wakamori S, Nagai M, Mitsuhashi K, Mine J, Fujimoto Y, Nagashima N, Yoshino F, Sugita Y, Nomura T, Okamatsu M,\u00a0Kida H<\/u>,\u00a0Sakoda Y<\/u>: \u201cGenetic and antigenic characterization of bovine viral diarrhea viruses isolated from cattle in Hokkaido, Japan\u201d, J Vet Med Sci<\/b>, 78(1), 61\u201370 (2016) i) ii)<\/li>\n
      6. Itoh Y, Shichinohe S, Nakayama M,\u00a0Igarashi M<\/u>, Ishii A, Ishigaki H, Ishida H, Kitagawa N, Sasamura T, Shiohara M, Doi M, Tsuchiya H, Nakamura S, Okamatsu M,\u00a0Sakoda Y<\/u>,\u00a0Kida H<\/u>, Ogasawara K: \u201cEmergence of H7N9 influenza A virus resistant to neuraminidase inhibitors in nonhuman primates\u201d, Antimicrob Agents Chemother<\/b>, 59(8),4962-73 (2015) i) ii)<\/li>\n
      7. Kozasa T, Abe Y, Mitsuhashi K, Tamura T, Aoki H, Ishimaru M, Nakamura S, Okamatsu M, Kida H<\/u>,\u00a0Sakoda Y<\/u> : \u201cAnalysis of a pair of END+ and END- viruses derived from the same bovine viral diarrhea virus stock reveals the amino acid determinants in Npro responsible for inhibition of type I interferon production\u201d, J Vet Med Sci<\/b>, 77(5), 511-8 (2015) i)<\/li>\n
      8. Kawahara R, Seto K, Taguchi M,\u00a0Nakajima C<\/u>, Kumeda Y,\u00a0Suzuki Y<\/u>: \u201cCharacterization of third-generation-cephalosporin-resistant shiga toxin-producing strains of Escherichia coli<\/em> O157:H7 in Japan\u201d, J Clin Microbiol<\/b>, 53(9), 3035-8 (2015) i) ii)<\/li>\n
      9. Usami O,Nakajima C<\/u>, Endo S, Inomata S, Kanamori H, Hirakata Y, Uchiyama B, Kaku M, Suzuki Y<\/u>, Hattori T: \u201cA case of Manila type Mycobacterium tuberculosis <\/em>infection in Japan\u201d, Clin Case Rep<\/b>, 3(7), 622-5 (2015) i) ii)<\/li>\n
      10. Ozawa M, Matsuu A, Yonezawa K, Igarashi M<\/u>, Okuya K, Kawabata T,<\/u>Ito K<\/u>, Tsukiyama-Kohara K, Taneno A, Deguchi E: \u201c<\/strong>Efficient isolation of swine influenza viruses by age-targeted specimen collection\u201d, J Clin Microbiol<\/b>, 53(4):1331-8\u00a0(2015) i)<\/li>\n
      11. Sato Y, Yamagishi J<\/u>, Yamashita R, Shinozaki N, Ye B, Yamada T, Yamamoto M, Nagasaki M, Tsuboi A: \u201cInter-individual differences in the oral bacteriome are greater than intra-day fluctuations in individuals\u201d, PLoS One<\/b>, 10(6), e0131607 (2015) i)<\/li>\n<\/ol>\n

         <\/p>\n

         <\/p>\n","protected":false},"excerpt":{"rendered":"

        Publications FY 2015 1) International collaborative papers (peer reviewed) 1.1) International collaborative pa […]<\/p>\n","protected":false},"author":4,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"open","ping_status":"open","template":"","meta":[],"_links":{"self":[{"href":"https:\/\/c-mng.cwh.hokudai.ac.jp\/gicore-icu.czc\/Root\/wp-json\/wp\/v2\/pages\/1103"}],"collection":[{"href":"https:\/\/c-mng.cwh.hokudai.ac.jp\/gicore-icu.czc\/Root\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/c-mng.cwh.hokudai.ac.jp\/gicore-icu.czc\/Root\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/c-mng.cwh.hokudai.ac.jp\/gicore-icu.czc\/Root\/wp-json\/wp\/v2\/users\/4"}],"replies":[{"embeddable":true,"href":"https:\/\/c-mng.cwh.hokudai.ac.jp\/gicore-icu.czc\/Root\/wp-json\/wp\/v2\/comments?post=1103"}],"version-history":[{"count":1,"href":"https:\/\/c-mng.cwh.hokudai.ac.jp\/gicore-icu.czc\/Root\/wp-json\/wp\/v2\/pages\/1103\/revisions"}],"predecessor-version":[{"id":3010,"href":"https:\/\/c-mng.cwh.hokudai.ac.jp\/gicore-icu.czc\/Root\/wp-json\/wp\/v2\/pages\/1103\/revisions\/3010"}],"wp:attachment":[{"href":"https:\/\/c-mng.cwh.hokudai.ac.jp\/gicore-icu.czc\/Root\/wp-json\/wp\/v2\/media?parent=1103"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}